Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 AL139011.1-202ENST00000642063 584 ntBASIC17.03■□□□□ 0.32
TRANK1O15050 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.02■□□□□ 0.32
TRANK1O15050 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRANK1O15050 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.02■□□□□ 0.32
TRANK1O15050 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRANK1O15050 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRANK1O15050 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRANK1O15050 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRANK1O15050 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.02■□□□□ 0.32
TRANK1O15050 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.02■□□□□ 0.32
TRANK1O15050 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
TRANK1O15050 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.02■□□□□ 0.32
TRANK1O15050 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRANK1O15050 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRANK1O15050 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.02■□□□□ 0.32
TRANK1O15050 AC092978.1-202ENST00000637590 1327 ntBASIC17.02■□□□□ 0.32
TRANK1O15050 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRANK1O15050 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRANK1O15050 AC016396.2-201ENST00000562575 1417 ntBASIC17.02■□□□□ 0.32
TRANK1O15050 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRANK1O15050 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRANK1O15050 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.02■□□□□ 0.32
TRANK1O15050 AC138028.6-201ENST00000616106 1482 ntBASIC17.02■□□□□ 0.32
TRANK1O15050 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRANK1O15050 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.02■□□□□ 0.31
TRANK1O15050 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRANK1O15050 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRANK1O15050 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRANK1O15050 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRANK1O15050 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.02■□□□□ 0.31
TRANK1O15050 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRANK1O15050 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.02■□□□□ 0.31
TRANK1O15050 HINT2P1-201ENST00000419438 481 ntBASIC17.02■□□□□ 0.31
TRANK1O15050 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRANK1O15050 MIR3619-201ENST00000579667 83 ntBASIC17.02■□□□□ 0.31
TRANK1O15050 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.02■□□□□ 0.31
TRANK1O15050 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
TRANK1O15050 AC008687.7-202ENST00000637404 953 ntBASIC17.02■□□□□ 0.31
TRANK1O15050 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRANK1O15050 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRANK1O15050 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TRANK1O15050 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRANK1O15050 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.02■□□□□ 0.31
TRANK1O15050 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TRANK1O15050 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRANK1O15050 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRANK1O15050 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRANK1O15050 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.01■□□□□ 0.31
TRANK1O15050 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.01■□□□□ 0.31
TRANK1O15050 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.01■□□□□ 0.31
TRANK1O15050 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TRANK1O15050 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRANK1O15050 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.01■□□□□ 0.31
TRANK1O15050 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRANK1O15050 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.01■□□□□ 0.31
TRANK1O15050 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRANK1O15050 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.01■□□□□ 0.31
TRANK1O15050 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRANK1O15050 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRANK1O15050 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRANK1O15050 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRANK1O15050 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRANK1O15050 AL355864.2-201ENST00000447420 863 ntBASIC17.01■□□□□ 0.31
TRANK1O15050 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.01■□□□□ 0.31
TRANK1O15050 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.01■□□□□ 0.31
TRANK1O15050 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRANK1O15050 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.01■□□□□ 0.31
TRANK1O15050 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRANK1O15050 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.01■□□□□ 0.31
TRANK1O15050 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.01■□□□□ 0.31
TRANK1O15050 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRANK1O15050 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.01■□□□□ 0.31
TRANK1O15050 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRANK1O15050 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.01■□□□□ 0.31
TRANK1O15050 AL603756.1-201ENST00000606511 2163 ntBASIC17.01■□□□□ 0.31
TRANK1O15050 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRANK1O15050 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRANK1O15050 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17■□□□□ 0.31
TRANK1O15050 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRANK1O15050 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17■□□□□ 0.31
TRANK1O15050 AC253536.4-201ENST00000440539 267 ntBASIC17■□□□□ 0.31
TRANK1O15050 AC120045.2-201ENST00000567334 178 ntBASIC17■□□□□ 0.31
TRANK1O15050 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRANK1O15050 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRANK1O15050 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRANK1O15050 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17■□□□□ 0.31
TRANK1O15050 AC067852.2-201ENST00000590513 2313 ntBASIC17■□□□□ 0.31
TRANK1O15050 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRANK1O15050 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRANK1O15050 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17■□□□□ 0.31
TRANK1O15050 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
TRANK1O15050 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRANK1O15050 AC005252.2-201ENST00000624630 1141 ntBASIC17■□□□□ 0.31
TRANK1O15050 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRANK1O15050 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRANK1O15050 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRANK1O15050 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRANK1O15050 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17■□□□□ 0.31
TRANK1O15050 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRANK1O15050 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms