Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNB4O00305 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CACNB4O00305 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.3■□□□□ 0.2
CACNB4O00305 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.3■□□□□ 0.2
CACNB4O00305 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CACNB4O00305 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CACNB4O00305 AC008677.1-201ENST00000519230 1561 ntBASIC16.3■□□□□ 0.2
CACNB4O00305 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.3■□□□□ 0.2
CACNB4O00305 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNB4O00305 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNB4O00305 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CACNB4O00305 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.29■□□□□ 0.2
CACNB4O00305 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CACNB4O00305 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 NFIC-211ENST00000641145 8399 ntBASIC16.29■□□□□ 0.2
CACNB4O00305 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CACNB4O00305 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.29■□□□□ 0.2
CACNB4O00305 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CACNB4O00305 AC105020.1-201ENST00000435356 2205 ntBASIC16.29■□□□□ 0.2
CACNB4O00305 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 AL603756.1-201ENST00000606511 2163 ntBASIC16.29■□□□□ 0.2
CACNB4O00305 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CACNB4O00305 HLA-H-201ENST00000383620 1096 ntBASIC16.29■□□□□ 0.2
CACNB4O00305 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.29■□□□□ 0.2
CACNB4O00305 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.29■□□□□ 0.2
CACNB4O00305 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CACNB4O00305 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.29■□□□□ 0.2
CACNB4O00305 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.29■□□□□ 0.2
CACNB4O00305 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.29■□□□□ 0.2
CACNB4O00305 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.29■□□□□ 0.2
CACNB4O00305 RARRES2P9-201ENST00000565168 469 ntBASIC16.29■□□□□ 0.2
CACNB4O00305 AC051619.7-201ENST00000568314 623 ntBASIC16.29■□□□□ 0.2
CACNB4O00305 SPTSSB-204ENST00000617024 1292 ntBASIC16.29■□□□□ 0.2
CACNB4O00305 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.29■□□□□ 0.2
CACNB4O00305 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.29■□□□□ 0.2
CACNB4O00305 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CACNB4O00305 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CACNB4O00305 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNB4O00305 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CACNB4O00305 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CACNB4O00305 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 GPAA1P2-202ENST00000606848 1787 ntBASIC16.28■□□□□ 0.2
CACNB4O00305 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNB4O00305 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CACNB4O00305 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNB4O00305 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CACNB4O00305 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CACNB4O00305 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.28■□□□□ 0.2
CACNB4O00305 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CACNB4O00305 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNB4O00305 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNB4O00305 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNB4O00305 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.28■□□□□ 0.2
CACNB4O00305 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
CACNB4O00305 DUX4L27-201ENST00000554796 1261 ntBASIC16.28■□□□□ 0.2
CACNB4O00305 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.28■□□□□ 0.2
CACNB4O00305 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.28■□□□□ 0.2
CACNB4O00305 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNB4O00305 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 AP3S2-216ENST00000617003 1561 ntBASIC16.28■□□□□ 0.2
CACNB4O00305 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CACNB4O00305 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.28■□□□□ 0.2
CACNB4O00305 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNB4O00305 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.28■□□□□ 0.2
CACNB4O00305 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CACNB4O00305 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms