Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 PCGF3-213ENST00000620529 1899 ntBASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 LINC01144-201ENST00000626198 1710 ntBASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 AL161645.1-201ENST00000622716 1255 ntBASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 AC092902.6-201ENST00000641783 218 ntBASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 ALOX12P2-203ENST00000570921 1945 ntBASIC15.04■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 PMS2P2-201ENST00000425039 1128 ntBASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.03■□□□□ -0
TNFSF12-TNFSF13A0A0A6YY99 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms