Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 FLJ38576-201ENST00000623820 2459 ntBASIC20.6■□□□□ 0.89
HDAC5Q9UQL6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC5Q9UQL6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 NKILA-202ENST00000614771 2598 ntBASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 AC142381.1-201ENST00000426099 345 ntBASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 AC024267.1-201ENST00000582320 895 ntBASIC20.58■□□□□ 0.89
HDAC5Q9UQL6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
HDAC5Q9UQL6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC5Q9UQL6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC5Q9UQL6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC5Q9UQL6 AC005622.1-201ENST00000636801 1703 ntBASIC20.58■□□□□ 0.88
HDAC5Q9UQL6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC5Q9UQL6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.58■□□□□ 0.88
HDAC5Q9UQL6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC5Q9UQL6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC5Q9UQL6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 ME2P1-201ENST00000426028 1970 ntBASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 HLA-J-203ENST00000494367 1087 ntBASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 AL365330.1-201ENST00000607459 531 ntBASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 AL139384.1-201ENST00000612143 3047 ntBASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC5Q9UQL6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms