Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 ZNF736P1Y-201ENST00000440402 1276 ntBASIC15.71■□□□□ 0.11
LHX6Q9UPM6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 SLC25A6P2-201ENST00000497974 877 ntBASIC15.71■□□□□ 0.11
LHX6Q9UPM6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 AC104989.1-201ENST00000519711 778 ntBASIC15.71■□□□□ 0.11
LHX6Q9UPM6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 AC027307.2-201ENST00000591252 911 ntBASIC15.71■□□□□ 0.11
LHX6Q9UPM6 AC083964.1-201ENST00000607549 630 ntBASIC15.71■□□□□ 0.11
LHX6Q9UPM6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
LHX6Q9UPM6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LHX6Q9UPM6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.71■□□□□ 0.1
LHX6Q9UPM6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LHX6Q9UPM6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.71■□□□□ 0.1
LHX6Q9UPM6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LHX6Q9UPM6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LHX6Q9UPM6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 REXO1L9P-201ENST00000604264 2108 ntBASIC15.7■□□□□ 0.1
LHX6Q9UPM6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 AC073310.1-201ENST00000423226 1033 ntBASIC15.7■□□□□ 0.1
LHX6Q9UPM6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 MIR4515-201ENST00000584082 81 ntBASIC15.7■□□□□ 0.1
LHX6Q9UPM6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 CHCHD2P3-201ENST00000603038 451 ntBASIC15.7■□□□□ 0.1
LHX6Q9UPM6 AL022328.3-201ENST00000607943 679 ntBASIC15.7■□□□□ 0.1
LHX6Q9UPM6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 AC007431.3-201ENST00000623221 587 ntBASIC15.7■□□□□ 0.1
LHX6Q9UPM6 AC004777.1-201ENST00000624317 287 ntBASIC15.7■□□□□ 0.1
LHX6Q9UPM6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.7■□□□□ 0.1
LHX6Q9UPM6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LHX6Q9UPM6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms