RNA–Protein interactions for RNA: ENST00000471993.1

AC078828.1-201, humanhuman

TSL 3 BASIC

Gene AC078828.1, Length 458 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078828.1-201ENST00000471993 AEBP2Q6ZN18 517 aaPredicted RBP37.43■■■■□ 3.58
AC078828.1-201ENST00000471993 CHIC1Q5VXU3 224 aa35.1■■■■□ 3.21
AC078828.1-201ENST00000471993 SENP3Q9H4L4 574 aaPredicted RBP31.98■■■□□ 2.71
AC078828.1-201ENST00000471993 PHF23Q9BUL5 403 aaPredicted RBP31.48■■■□□ 2.63
AC078828.1-201ENST00000471993 FOXD1Q16676 465 aa29.86■■■□□ 2.37
AC078828.1-201ENST00000471993 POTEDQ86YR6 584 aa28.21■■■□□ 2.11
AC078828.1-201ENST00000471993 MSH5O43196 834 aa28.12■■■□□ 2.09
AC078828.1-201ENST00000471993 PLPPR3Q6T4P5 718 aa27.82■■■□□ 2.04
AC078828.1-201ENST00000471993 PIAS4Q8N2W9 510 aaPredicted RBP27.77■■■□□ 2.04
AC078828.1-201ENST00000471993 PPP6R1Q9UPN7 881 aa27.57■■■□□ 2
AC078828.1-201ENST00000471993 ADRA2BP18089 450 aa27.43■■□□□ 1.98
AC078828.1-201ENST00000471993 MAPK8IP2Q13387 824 aaPredicted RBP25.32■■□□□ 1.64
AC078828.1-201ENST00000471993 DMRT2Q9Y5R5 561 aa25.3■■□□□ 1.64
AC078828.1-201ENST00000471993 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
AC078828.1-201ENST00000471993 CACNB1Q02641 598 aaPredicted RBP24.36■■□□□ 1.49
AC078828.1-201ENST00000471993 PPP4R3CPQ6ZMV5 832 aa24.31■■□□□ 1.48
AC078828.1-201ENST00000471993 HOXD11P31277 338 aaPredicted RBP24.21■■□□□ 1.47
AC078828.1-201ENST00000471993 DCAF8L1A6NGE4 600 aa24.18■■□□□ 1.46
AC078828.1-201ENST00000471993 CNKSR2Q8WXI2 1034 aa23.98■■□□□ 1.43
AC078828.1-201ENST00000471993 RNF39Q9H2S5 420 aa23.98■■□□□ 1.43
AC078828.1-201ENST00000471993 RNF216Q9NWF9 866 aaPredicted RBP23.9■■□□□ 1.42
AC078828.1-201ENST00000471993 C1QBPQ07021 282 aaKnown RBP23.58■■□□□ 1.37
AC078828.1-201ENST00000471993 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
AC078828.1-201ENST00000471993 NCBP3Q53F19 620 aaKnown RBP23.23■■□□□ 1.31
AC078828.1-201ENST00000471993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.98■■□□□ 1.27
AC078828.1-201ENST00000471993 NPM3O75607 178 aaKnown RBP22.93■■□□□ 1.26
AC078828.1-201ENST00000471993 U3KPZ7 1027 aaPredicted RBP22.51■■□□□ 1.19
AC078828.1-201ENST00000471993 SPINK5Q9NQ38 1064 aaPredicted RBP22.3■■□□□ 1.16
AC078828.1-201ENST00000471993 DSG3P32926 999 aa22.28■■□□□ 1.16
AC078828.1-201ENST00000471993 CAPN15O75808 1086 aa22.25■■□□□ 1.15
AC078828.1-201ENST00000471993 KCNA4P22459 653 aa22.08■■□□□ 1.13
AC078828.1-201ENST00000471993 SLC4A2P04920 1241 aa22.03■■□□□ 1.12
AC078828.1-201ENST00000471993 POTEHQ6S545 545 aa22.01■■□□□ 1.11
AC078828.1-201ENST00000471993 APLP2Q06481 763 aa21.8■■□□□ 1.08
AC078828.1-201ENST00000471993 TRHP20396 242 aaPredicted RBP21.77■■□□□ 1.08
AC078828.1-201ENST00000471993 ZNF219Q9P2Y4 722 aaPredicted RBP21.77■■□□□ 1.08
AC078828.1-201ENST00000471993 ABCB7O75027 752 aa21.7■■□□□ 1.06
AC078828.1-201ENST00000471993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
AC078828.1-201ENST00000471993 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
AC078828.1-201ENST00000471993 SAMD1Q6SPF0 538 aaPredicted RBP21.55■■□□□ 1.04
AC078828.1-201ENST00000471993 RBM42Q9BTD8 480 aaKnown RBP21.26■□□□□ 0.99
AC078828.1-201ENST00000471993 MYCNP04198 464 aaPredicted RBP21.21■□□□□ 0.99
AC078828.1-201ENST00000471993 POLA2Q14181 598 aa21.11■□□□□ 0.97
AC078828.1-201ENST00000471993 CHRDL2Q6WN34 429 aa20.97■□□□□ 0.95
AC078828.1-201ENST00000471993 ATF5Q9Y2D1 282 aaPredicted RBP20.77■□□□□ 0.92
AC078828.1-201ENST00000471993 FOXD4L1Q9NU39 408 aa20.75■□□□□ 0.91
AC078828.1-201ENST00000471993 SLC4A1APQ9BWU0 796 aaKnown RBP20.73■□□□□ 0.91
AC078828.1-201ENST00000471993 AKT1S1Q96B36 256 aa20.68■□□□□ 0.9
AC078828.1-201ENST00000471993 ZBTB12Q9Y330 459 aaPredicted RBP20.68■□□□□ 0.9
AC078828.1-201ENST00000471993 REM2Q8IYK8 340 aaPredicted RBP20.48■□□□□ 0.87
AC078828.1-201ENST00000471993 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
AC078828.1-201ENST00000471993 SP7Q8TDD2 431 aaPredicted RBP20.43■□□□□ 0.86
AC078828.1-201ENST00000471993 PIP4P2Q8N4L2 257 aa20.39■□□□□ 0.85
AC078828.1-201ENST00000471993 ZBTB22O15209 634 aa20.32■□□□□ 0.84
AC078828.1-201ENST00000471993 PITPNM1O00562 1244 aa20.28■□□□□ 0.84
AC078828.1-201ENST00000471993 FXR2P51116 673 aaKnown RBP eCLIP20.21■□□□□ 0.83
AC078828.1-201ENST00000471993 ATXN8OSP0DMR3 200 aa20.17■□□□□ 0.82
AC078828.1-201ENST00000471993 HAX1O00165 279 aa20.08■□□□□ 0.81
AC078828.1-201ENST00000471993 SPDYE2BA6NHP3 402 aa20■□□□□ 0.79
AC078828.1-201ENST00000471993 SPDYE6P0CI01 402 aa20■□□□□ 0.79
AC078828.1-201ENST00000471993 SPDYE2Q495Y8 402 aa20■□□□□ 0.79
AC078828.1-201ENST00000471993 FBLN2P98095 1184 aa19.95■□□□□ 0.78
AC078828.1-201ENST00000471993 EVX2Q03828 476 aa19.84■□□□□ 0.77
AC078828.1-201ENST00000471993 MKRN4PQ13434 485 aaPredicted RBP19.8■□□□□ 0.76
AC078828.1-201ENST00000471993 SPDYE1Q8NFV5 336 aaPredicted RBP19.75■□□□□ 0.75
AC078828.1-201ENST00000471993 PRKAR2AP13861 404 aaKnown RBP19.72■□□□□ 0.75
AC078828.1-201ENST00000471993 SSUH2Q9Y2M2 353 aa19.72■□□□□ 0.75
AC078828.1-201ENST00000471993 CLEC11AQ9Y240 323 aa19.69■□□□□ 0.74
AC078828.1-201ENST00000471993 ZNF692Q9BU19 519 aaPredicted RBP19.65■□□□□ 0.74
AC078828.1-201ENST00000471993 C19orf67A6NJJ6 358 aa19.58■□□□□ 0.72
AC078828.1-201ENST00000471993 CHADLQ6NUI6 762 aa19.39■□□□□ 0.69
AC078828.1-201ENST00000471993 GABBR2O75899 941 aa19.37■□□□□ 0.69
AC078828.1-201ENST00000471993 PABPN1Q86U42 306 aaKnown RBP eCLIP19.36■□□□□ 0.69
AC078828.1-201ENST00000471993 PRR29P0C7W0 189 aa19.32■□□□□ 0.68
AC078828.1-201ENST00000471993 LHX8Q68G74 356 aa19.13■□□□□ 0.65
AC078828.1-201ENST00000471993 FARP1Q9Y4F1 1045 aaPredicted RBP19.08■□□□□ 0.64
AC078828.1-201ENST00000471993 CD44P16070 742 aaKnown RBP19.07■□□□□ 0.64
AC078828.1-201ENST00000471993 POTEIP0CG38 1075 aa18.98■□□□□ 0.63
AC078828.1-201ENST00000471993 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
AC078828.1-201ENST00000471993 CLCN6P51797 869 aa18.93■□□□□ 0.62
AC078828.1-201ENST00000471993 ZNF579Q8NAF0 562 aaKnown RBP18.8■□□□□ 0.6
AC078828.1-201ENST00000471993 CREBZFQ9NS37 354 aa18.79■□□□□ 0.6
AC078828.1-201ENST00000471993 STAG3Q9UJ98 1225 aa18.74■□□□□ 0.59
AC078828.1-201ENST00000471993 DCBLD2Q96PD2 775 aa18.72■□□□□ 0.59
AC078828.1-201ENST00000471993 ZRANB1Q9UGI0 708 aa18.72■□□□□ 0.59
AC078828.1-201ENST00000471993 SPDYE4A6NLX3 237 aa18.59■□□□□ 0.57
AC078828.1-201ENST00000471993 GALR2O43603 387 aaPredicted RBP18.58■□□□□ 0.56
AC078828.1-201ENST00000471993 PAK3O75914 559 aaPredicted RBP18.45■□□□□ 0.54
AC078828.1-201ENST00000471993 MNX1P50219 401 aaPredicted RBP18.44■□□□□ 0.54
AC078828.1-201ENST00000471993 PHF12Q96QT6 1004 aa18.43■□□□□ 0.54
AC078828.1-201ENST00000471993 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
AC078828.1-201ENST00000471993 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
AC078828.1-201ENST00000471993 OTUD5Q96G74 571 aa18.37■□□□□ 0.53
AC078828.1-201ENST00000471993 POTEB2H3BUK9 544 aa18.35■□□□□ 0.53
AC078828.1-201ENST00000471993 PELP1Q8IZL8 1130 aaKnown RBP18.26■□□□□ 0.51
AC078828.1-201ENST00000471993 PLSCR2Q9NRY7 297 aa18.21■□□□□ 0.51
AC078828.1-201ENST00000471993 ASTLQ6HA08 431 aaPredicted RBP18.19■□□□□ 0.5
AC078828.1-201ENST00000471993 MS4A3Q96HJ5 214 aa18.19■□□□□ 0.5
AC078828.1-201ENST00000471993 PROM2Q8N271 834 aa18.17■□□□□ 0.5
AC078828.1-201ENST00000471993 ATMINO43313 823 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms