Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 IGHV3-47-201ENST00000425060 335 ntBASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 AC087388.1-201ENST00000571370 1112 ntBASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 IER3-202ENST00000376377 1350 ntBASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 AC024909.3-201ENST00000611513 2257 ntBASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COMMD4Q9H0A8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 AC092329.2-201ENST00000598402 547 ntBASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COMMD4Q9H0A8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms