Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 AL009178.2-201ENST00000597278 2719 ntBASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 FAM45BP-202ENST00000592932 1624 ntBASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 DDT-203ENST00000403754 569 ntTSL 3 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 AC096633.1-201ENST00000422446 749 ntBASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 SAPCD2P4-201ENST00000424595 1171 ntBASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 DDT-206ENST00000430101 573 ntTSL 2 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 MAP2K4P1-201ENST00000438453 1195 ntBASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LCE3DQ9BYE3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms