Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.69■□□□□ 0.1
COL21A1Q96P44 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 Z83851.2-201ENST00000609564 659 ntBASIC15.69■□□□□ 0.1
COL21A1Q96P44 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.69■□□□□ 0.1
COL21A1Q96P44 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
COL21A1Q96P44 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
COL21A1Q96P44 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 AC006538.1-201ENST00000567905 1585 ntBASIC15.69■□□□□ 0.1
COL21A1Q96P44 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
COL21A1Q96P44 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
COL21A1Q96P44 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.69■□□□□ 0.1
COL21A1Q96P44 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
COL21A1Q96P44 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.68■□□□□ 0.1
COL21A1Q96P44 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 AC145285.3-201ENST00000564603 959 ntBASIC15.68■□□□□ 0.1
COL21A1Q96P44 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 AC004790.2-201ENST00000623588 572 ntBASIC15.68■□□□□ 0.1
COL21A1Q96P44 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 AC006277.1-201ENST00000624348 1610 ntBASIC15.68■□□□□ 0.1
COL21A1Q96P44 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.68■□□□□ 0.1
COL21A1Q96P44 AC104109.2-201ENST00000602919 1418 ntBASIC15.68■□□□□ 0.1
COL21A1Q96P44 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL21A1Q96P44 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
COL21A1Q96P44 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
COL21A1Q96P44 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
COL21A1Q96P44 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.67■□□□□ 0.1
COL21A1Q96P44 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.67■□□□□ 0.1
COL21A1Q96P44 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.67■□□□□ 0.1
COL21A1Q96P44 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.67■□□□□ 0.1
COL21A1Q96P44 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.67■□□□□ 0.1
COL21A1Q96P44 PRSS29P-201ENST00000440800 595 ntBASIC15.67■□□□□ 0.1
COL21A1Q96P44 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.67■□□□□ 0.1
COL21A1Q96P44 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.67■□□□□ 0.1
COL21A1Q96P44 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.67■□□□□ 0.1
COL21A1Q96P44 MIR4751-201ENST00000578027 74 ntBASIC15.67■□□□□ 0.1
COL21A1Q96P44 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.67■□□□□ 0.1
COL21A1Q96P44 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.67■□□□□ 0.1
COL21A1Q96P44 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL21A1Q96P44 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms