Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 EMBP1-201ENST00000458200 901 ntBASIC14.9□□□□□ -0.02
PTP4A1Q93096 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 SART3-203ENST00000546611 1184 ntBASIC14.9□□□□□ -0.02
PTP4A1Q93096 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 MTDHP4-201ENST00000600287 670 ntBASIC14.9□□□□□ -0.02
PTP4A1Q93096 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 AL691432.3-201ENST00000621860 400 ntBASIC14.9□□□□□ -0.02
PTP4A1Q93096 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.9□□□□□ -0.02
PTP4A1Q93096 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.89□□□□□ -0.03
PTP4A1Q93096 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 AC004870.1-201ENST00000315132 882 ntBASIC14.89□□□□□ -0.03
PTP4A1Q93096 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.89□□□□□ -0.03
PTP4A1Q93096 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.89□□□□□ -0.03
PTP4A1Q93096 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 POU5F1P6-201ENST00000466990 990 ntBASIC14.89□□□□□ -0.03
PTP4A1Q93096 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.89□□□□□ -0.03
PTP4A1Q93096 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.89□□□□□ -0.03
PTP4A1Q93096 CYP2A7P1-201ENST00000595391 815 ntBASIC14.89□□□□□ -0.03
PTP4A1Q93096 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.89□□□□□ -0.03
PTP4A1Q93096 AC010654.1-201ENST00000615722 808 ntBASIC14.89□□□□□ -0.03
PTP4A1Q93096 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.89□□□□□ -0.03
PTP4A1Q93096 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.89□□□□□ -0.03
PTP4A1Q93096 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PTP4A1Q93096 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTP4A1Q93096 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PTP4A1Q93096 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PTP4A1Q93096 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PTP4A1Q93096 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PTP4A1Q93096 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms