Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 HLA-V-204ENST00000476601 1289 ntBASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 AL138828.2-201ENST00000615812 383 ntBASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 AL390754.1-201ENST00000619088 582 ntBASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
NEDD1Q8NHV4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.14■□□□□ 0.66
NEDD1Q8NHV4 OR6D1P-202ENST00000641007 5290 ntBASIC19.14■□□□□ 0.66
NEDD1Q8NHV4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NEDD1Q8NHV4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.14■□□□□ 0.66
NEDD1Q8NHV4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 FAM8A3P-201ENST00000427218 844 ntBASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 IGHV3-42-201ENST00000520410 361 ntBASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 AC027369.6-201ENST00000525520 931 ntBASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.14■□□□□ 0.65
NEDD1Q8NHV4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 AJ011932.1-201ENST00000621707 465 ntBASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 AL590560.3-201ENST00000623350 461 ntBASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 ME2P1-201ENST00000426028 1970 ntBASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD1Q8NHV4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD1Q8NHV4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms