Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 CNN2P2-201ENST00000443536 909 ntBASIC17.74■□□□□ 0.43
BEST2Q8NFU1 AC093724.1-201ENST00000448659 1027 ntBASIC17.74■□□□□ 0.43
BEST2Q8NFU1 CNN2P3-201ENST00000450201 906 ntBASIC17.74■□□□□ 0.43
BEST2Q8NFU1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 AL136317.3-201ENST00000618497 906 ntBASIC17.74■□□□□ 0.43
BEST2Q8NFU1 Z92544.3-201ENST00000624747 417 ntBASIC17.74■□□□□ 0.43
BEST2Q8NFU1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 LINC01144-201ENST00000626198 1710 ntBASIC17.74■□□□□ 0.43
BEST2Q8NFU1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BEST2Q8NFU1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 UBALD1-205ENST00000590891 2641 ntBASIC17.73■□□□□ 0.43
BEST2Q8NFU1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 MIR770-201ENST00000390219 98 ntBASIC17.73■□□□□ 0.43
BEST2Q8NFU1 SPDYE7P-202ENST00000420373 878 ntBASIC17.73■□□□□ 0.43
BEST2Q8NFU1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 FAM86GP-201ENST00000448322 971 ntBASIC17.73■□□□□ 0.43
BEST2Q8NFU1 AC067863.1-201ENST00000494933 530 ntBASIC17.73■□□□□ 0.43
BEST2Q8NFU1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 AC098859.1-201ENST00000502915 1238 ntBASIC17.73■□□□□ 0.43
BEST2Q8NFU1 AC069262.1-201ENST00000539058 672 ntBASIC17.73■□□□□ 0.43
BEST2Q8NFU1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST2Q8NFU1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 FOXO1B-201ENST00000504678 1527 ntBASIC17.72■□□□□ 0.43
BEST2Q8NFU1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 HLA-H-201ENST00000383620 1096 ntBASIC17.72■□□□□ 0.43
BEST2Q8NFU1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST2Q8NFU1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms