Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF17Q5VTA0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF17Q5VTA0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF17Q5VTA0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF17Q5VTA0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
PRAMEF17Q5VTA0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
PRAMEF17Q5VTA0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.76■□□□□ 0.11
PRAMEF17Q5VTA0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF17Q5VTA0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF17Q5VTA0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF17Q5VTA0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.76■□□□□ 0.11
PRAMEF17Q5VTA0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 CNN2P2-201ENST00000443536 909 ntBASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 BCRP1-201ENST00000444246 691 ntBASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 CNN2P3-201ENST00000450201 906 ntBASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 KRT18P34-201ENST00000488218 1270 ntBASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 AL512356.2-201ENST00000546955 174 ntBASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 SPCS2P1-201ENST00000561636 679 ntBASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 AC051619.7-201ENST00000568314 623 ntBASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 AC015911.4-201ENST00000588022 1070 ntBASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 AL136317.3-201ENST00000618497 906 ntBASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.75■□□□□ 0.11
PRAMEF17Q5VTA0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 RNF216P1-203ENST00000404404 2427 ntBASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 AC080080.1-201ENST00000625121 2420 ntBASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 MIR943-201ENST00000401286 94 ntBASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 AC142381.1-201ENST00000426099 345 ntBASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 FAM8A3P-201ENST00000427218 844 ntBASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 AC011467.4-201ENST00000594891 528 ntBASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 MIR6080-201ENST00000617359 66 ntBASIC15.74■□□□□ 0.11
PRAMEF17Q5VTA0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms