Protein–RNA interactions for Protein: P49747

COMP, Cartilage oligomeric matrix protein, humanhuman

Predicted RBP Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMPP49747 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COMPP49747 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
COMPP49747 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COMPP49747 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.78□□□□□ -0.2
COMPP49747 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COMPP49747 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COMPP49747 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
COMPP49747 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
COMPP49747 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COMPP49747 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMPP49747 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMPP49747 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMPP49747 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.77□□□□□ -0.21
COMPP49747 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
COMPP49747 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMPP49747 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
COMPP49747 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMPP49747 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.77□□□□□ -0.21
COMPP49747 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
COMPP49747 PMS2P4-201ENST00000412466 1052 ntBASIC13.77□□□□□ -0.21
COMPP49747 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.77□□□□□ -0.21
COMPP49747 AC005034.1-201ENST00000426657 489 ntBASIC13.77□□□□□ -0.21
COMPP49747 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.77□□□□□ -0.21
COMPP49747 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMPP49747 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.77□□□□□ -0.21
COMPP49747 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COMPP49747 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.77□□□□□ -0.21
COMPP49747 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.77□□□□□ -0.21
COMPP49747 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.77□□□□□ -0.21
COMPP49747 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.77□□□□□ -0.21
COMPP49747 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COMPP49747 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.77□□□□□ -0.21
COMPP49747 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.77□□□□□ -0.21
COMPP49747 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMPP49747 AC023141.13-201ENST00000604991 943 ntBASIC13.77□□□□□ -0.21
COMPP49747 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMPP49747 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.77□□□□□ -0.21
COMPP49747 REXO1L3P-201ENST00000622202 1288 ntBASIC13.77□□□□□ -0.21
COMPP49747 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
COMPP49747 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
COMPP49747 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
COMPP49747 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMPP49747 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMPP49747 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.77□□□□□ -0.21
COMPP49747 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMPP49747 DOC2GP-204ENST00000639052 2548 ntBASIC13.77□□□□□ -0.21
COMPP49747 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
COMPP49747 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.76□□□□□ -0.21
COMPP49747 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.76□□□□□ -0.21
COMPP49747 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.76□□□□□ -0.21
COMPP49747 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
COMPP49747 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.76□□□□□ -0.21
COMPP49747 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.76□□□□□ -0.21
COMPP49747 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.76□□□□□ -0.21
COMPP49747 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.76□□□□□ -0.21
COMPP49747 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.76□□□□□ -0.21
COMPP49747 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.76□□□□□ -0.21
COMPP49747 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
COMPP49747 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.76□□□□□ -0.21
COMPP49747 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.76□□□□□ -0.21
COMPP49747 HLA-J-202ENST00000469281 1241 ntBASIC13.76□□□□□ -0.21
COMPP49747 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.76□□□□□ -0.21
COMPP49747 AC069262.1-201ENST00000539058 672 ntBASIC13.76□□□□□ -0.21
COMPP49747 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.76□□□□□ -0.21
COMPP49747 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.76□□□□□ -0.21
COMPP49747 AC092902.6-201ENST00000641783 218 ntBASIC13.76□□□□□ -0.21
COMPP49747 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 C8orf49-201ENST00000525043 1968 ntBASIC13.76□□□□□ -0.21
COMPP49747 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
COMPP49747 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMPP49747 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms