Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 PCGF3-213ENST00000620529 1899 ntBASIC16.66■□□□□ 0.26
MDH1P40925 ITM2C-210ENST00000620962 501 ntBASIC16.66■□□□□ 0.26
MDH1P40925 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.66■□□□□ 0.26
MDH1P40925 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.66■□□□□ 0.26
MDH1P40925 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MDH1P40925 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.66■□□□□ 0.26
MDH1P40925 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.66■□□□□ 0.26
MDH1P40925 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.65■□□□□ 0.26
MDH1P40925 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.65■□□□□ 0.26
MDH1P40925 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.65■□□□□ 0.26
MDH1P40925 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MDH1P40925 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.65■□□□□ 0.26
MDH1P40925 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MDH1P40925 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
MDH1P40925 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.65■□□□□ 0.26
MDH1P40925 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.65■□□□□ 0.26
MDH1P40925 TSPY20P-201ENST00000450910 630 ntBASIC16.65■□□□□ 0.26
MDH1P40925 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MDH1P40925 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.65■□□□□ 0.26
MDH1P40925 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MDH1P40925 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.65■□□□□ 0.26
MDH1P40925 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.65■□□□□ 0.26
MDH1P40925 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.65■□□□□ 0.26
MDH1P40925 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MDH1P40925 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 AP003680.1-201ENST00000598970 3660 ntBASIC16.65■□□□□ 0.26
MDH1P40925 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
MDH1P40925 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.65■□□□□ 0.26
MDH1P40925 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.65■□□□□ 0.26
MDH1P40925 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
MDH1P40925 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MDH1P40925 AC139749.1-202ENST00000617529 3139 ntBASIC16.65■□□□□ 0.26
MDH1P40925 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MDH1P40925 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.65■□□□□ 0.26
MDH1P40925 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
MDH1P40925 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.64■□□□□ 0.26
MDH1P40925 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.64■□□□□ 0.25
MDH1P40925 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MDH1P40925 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
MDH1P40925 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.64■□□□□ 0.25
MDH1P40925 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 ACTG1P4-201ENST00000425123 1122 ntBASIC16.64■□□□□ 0.25
MDH1P40925 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.64■□□□□ 0.25
MDH1P40925 ZNF444P1-201ENST00000559497 298 ntBASIC16.64■□□□□ 0.25
MDH1P40925 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.64■□□□□ 0.25
MDH1P40925 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.64■□□□□ 0.25
MDH1P40925 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MDH1P40925 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.64■□□□□ 0.25
MDH1P40925 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.64■□□□□ 0.25
MDH1P40925 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MDH1P40925 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.64■□□□□ 0.25
MDH1P40925 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.64■□□□□ 0.25
MDH1P40925 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
MDH1P40925 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.64■□□□□ 0.25
MDH1P40925 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.64■□□□□ 0.25
MDH1P40925 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MDH1P40925 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.64■□□□□ 0.25
MDH1P40925 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MDH1P40925 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.63■□□□□ 0.25
MDH1P40925 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms