Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.09■□□□□ 0.33
BRAFP15056 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.09■□□□□ 0.33
BRAFP15056 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.09■□□□□ 0.33
BRAFP15056 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.09■□□□□ 0.33
BRAFP15056 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.09■□□□□ 0.33
BRAFP15056 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BRAFP15056 AC023824.1-201ENST00000562945 2975 ntBASIC17.09■□□□□ 0.33
BRAFP15056 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.09■□□□□ 0.33
BRAFP15056 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
BRAFP15056 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
BRAFP15056 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRAFP15056 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRAFP15056 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRAFP15056 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRAFP15056 AC092850.2-201ENST00000623821 2697 ntBASIC17.08■□□□□ 0.33
BRAFP15056 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRAFP15056 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.08■□□□□ 0.33
BRAFP15056 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRAFP15056 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRAFP15056 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BRAFP15056 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BRAFP15056 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRAFP15056 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.08■□□□□ 0.32
BRAFP15056 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BRAFP15056 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRAFP15056 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.08■□□□□ 0.32
BRAFP15056 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRAFP15056 AC243591.1-201ENST00000452967 1364 ntBASIC17.08■□□□□ 0.32
BRAFP15056 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.08■□□□□ 0.32
BRAFP15056 AP000347.1-202ENST00000435868 847 ntBASIC17.08■□□□□ 0.32
BRAFP15056 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.08■□□□□ 0.32
BRAFP15056 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.08■□□□□ 0.32
BRAFP15056 AC012640.2-201ENST00000561606 901 ntBASIC17.08■□□□□ 0.32
BRAFP15056 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.08■□□□□ 0.32
BRAFP15056 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.08■□□□□ 0.32
BRAFP15056 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRAFP15056 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
BRAFP15056 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BRAFP15056 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
BRAFP15056 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.08■□□□□ 0.32
BRAFP15056 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRAFP15056 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BRAFP15056 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRAFP15056 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRAFP15056 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.08■□□□□ 0.32
BRAFP15056 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRAFP15056 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
BRAFP15056 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
BRAFP15056 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
BRAFP15056 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
BRAFP15056 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
BRAFP15056 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
BRAFP15056 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.07■□□□□ 0.32
BRAFP15056 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
BRAFP15056 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.07■□□□□ 0.32
BRAFP15056 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.07■□□□□ 0.32
BRAFP15056 HLA-J-202ENST00000469281 1241 ntBASIC17.07■□□□□ 0.32
BRAFP15056 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.07■□□□□ 0.32
BRAFP15056 OR7E14P-202ENST00000530490 1290 ntBASIC17.07■□□□□ 0.32
BRAFP15056 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
BRAFP15056 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.07■□□□□ 0.32
BRAFP15056 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.07■□□□□ 0.32
BRAFP15056 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
BRAFP15056 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.07■□□□□ 0.32
BRAFP15056 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.07■□□□□ 0.32
BRAFP15056 AC107918.4-202ENST00000641623 219 ntBASIC17.07■□□□□ 0.32
BRAFP15056 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
BRAFP15056 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
BRAFP15056 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRAFP15056 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BRAFP15056 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.06■□□□□ 0.32
BRAFP15056 AC009336.1-201ENST00000608941 1553 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms