Protein–RNA interactions for Protein: P0DMB2

C8orf88, Uncharacterized protein C8orf88, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf88P0DMB2 LINC00895-201ENST00000629028 1637 ntBASIC13.17□□□□□ -0.3
C8orf88P0DMB2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C8orf88P0DMB2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C8orf88P0DMB2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
C8orf88P0DMB2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
C8orf88P0DMB2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C8orf88P0DMB2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 AL160237.2-201ENST00000556165 472 ntBASIC13.16□□□□□ -0.3
C8orf88P0DMB2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 AC021087.4-201ENST00000563761 564 ntBASIC13.16□□□□□ -0.3
C8orf88P0DMB2 MTDHP4-201ENST00000600287 670 ntBASIC13.16□□□□□ -0.3
C8orf88P0DMB2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
C8orf88P0DMB2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C8orf88P0DMB2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms