Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 DUX4L17-201ENST00000557360 1267 ntBASIC15.29■□□□□ 0.04
IDH3BO43837 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.29■□□□□ 0.04
IDH3BO43837 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
IDH3BO43837 AC010331.1-201ENST00000611423 582 ntBASIC15.29■□□□□ 0.04
IDH3BO43837 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.29■□□□□ 0.04
IDH3BO43837 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.29■□□□□ 0.04
IDH3BO43837 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 HLA-A-202ENST00000376806 1854 ntBASIC15.29■□□□□ 0.04
IDH3BO43837 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.29■□□□□ 0.04
IDH3BO43837 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
IDH3BO43837 FAM45BP-202ENST00000592932 1624 ntBASIC15.28■□□□□ 0.04
IDH3BO43837 AC079776.2-201ENST00000641154 1609 ntBASIC15.28■□□□□ 0.04
IDH3BO43837 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.28■□□□□ 0.04
IDH3BO43837 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
IDH3BO43837 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
IDH3BO43837 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.28■□□□□ 0.04
IDH3BO43837 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
IDH3BO43837 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 LINC00982-205ENST00000420957 435 ntBASIC15.28■□□□□ 0.04
IDH3BO43837 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 PRYP5-201ENST00000451909 266 ntBASIC15.28■□□□□ 0.04
IDH3BO43837 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
IDH3BO43837 KRT18P21-201ENST00000515767 1272 ntBASIC15.28■□□□□ 0.04
IDH3BO43837 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.28■□□□□ 0.04
IDH3BO43837 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.28■□□□□ 0.04
IDH3BO43837 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.28■□□□□ 0.04
IDH3BO43837 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
IDH3BO43837 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.28■□□□□ 0.04
IDH3BO43837 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.28■□□□□ 0.04
IDH3BO43837 AP000550.4-202ENST00000639755 178 ntBASIC15.28■□□□□ 0.04
IDH3BO43837 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.28■□□□□ 0.04
IDH3BO43837 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 AL391256.1-201ENST00000443260 1855 ntBASIC15.28■□□□□ 0.04
IDH3BO43837 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
IDH3BO43837 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.28■□□□□ 0.04
IDH3BO43837 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.28■□□□□ 0.04
IDH3BO43837 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.28■□□□□ 0.04
IDH3BO43837 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.28■□□□□ 0.04
IDH3BO43837 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.28■□□□□ 0.04
IDH3BO43837 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.28■□□□□ 0.04
IDH3BO43837 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
IDH3BO43837 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
IDH3BO43837 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IDH3BO43837 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IDH3BO43837 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IDH3BO43837 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IDH3BO43837 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.27■□□□□ 0.04
IDH3BO43837 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IDH3BO43837 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.27■□□□□ 0.04
IDH3BO43837 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.27■□□□□ 0.04
IDH3BO43837 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.27■□□□□ 0.04
IDH3BO43837 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
IDH3BO43837 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
IDH3BO43837 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IDH3BO43837 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
IDH3BO43837 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IDH3BO43837 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.27■□□□□ 0.04
IDH3BO43837 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
IDH3BO43837 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IDH3BO43837 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IDH3BO43837 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.27■□□□□ 0.04
IDH3BO43837 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.27■□□□□ 0.04
IDH3BO43837 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.27■□□□□ 0.04
IDH3BO43837 AC087388.1-201ENST00000571370 1112 ntBASIC15.27■□□□□ 0.04
IDH3BO43837 MIR5100-201ENST00000579544 119 ntBASIC15.27■□□□□ 0.04
IDH3BO43837 MIR3180-1-201ENST00000580374 94 ntBASIC15.27■□□□□ 0.04
IDH3BO43837 MIR3180-3-201ENST00000584616 94 ntBASIC15.27■□□□□ 0.04
IDH3BO43837 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IDH3BO43837 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
IDH3BO43837 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.27■□□□□ 0.04
IDH3BO43837 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IDH3BO43837 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
IDH3BO43837 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
IDH3BO43837 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IDH3BO43837 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
IDH3BO43837 AL122018.1-201ENST00000446607 2310 ntBASIC15.27■□□□□ 0.03
IDH3BO43837 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.27■□□□□ 0.03
IDH3BO43837 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms