Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
IFRD1O00458 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IFRD1O00458 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IFRD1O00458 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IFRD1O00458 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
IFRD1O00458 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
IFRD1O00458 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IFRD1O00458 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IFRD1O00458 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
IFRD1O00458 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IFRD1O00458 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.36■□□□□ 0.21
IFRD1O00458 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
IFRD1O00458 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.36■□□□□ 0.21
IFRD1O00458 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
IFRD1O00458 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.36■□□□□ 0.21
IFRD1O00458 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
IFRD1O00458 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
IFRD1O00458 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.36■□□□□ 0.21
IFRD1O00458 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.36■□□□□ 0.21
IFRD1O00458 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
IFRD1O00458 AL031055.1-201ENST00000606362 631 ntBASIC16.36■□□□□ 0.21
IFRD1O00458 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
IFRD1O00458 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.36■□□□□ 0.21
IFRD1O00458 C20orf181-201ENST00000623918 480 ntBASIC16.36■□□□□ 0.21
IFRD1O00458 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.36■□□□□ 0.21
IFRD1O00458 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.36■□□□□ 0.21
IFRD1O00458 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
IFRD1O00458 AL139011.1-202ENST00000642063 584 ntBASIC16.36■□□□□ 0.21
IFRD1O00458 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.36■□□□□ 0.21
IFRD1O00458 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFRD1O00458 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
IFRD1O00458 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.35■□□□□ 0.21
IFRD1O00458 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
IFRD1O00458 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFRD1O00458 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.35■□□□□ 0.21
IFRD1O00458 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.35■□□□□ 0.21
IFRD1O00458 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.35■□□□□ 0.21
IFRD1O00458 AL391005.1-201ENST00000623953 2435 ntBASIC16.35■□□□□ 0.21
IFRD1O00458 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.35■□□□□ 0.21
IFRD1O00458 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.35■□□□□ 0.21
IFRD1O00458 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.35■□□□□ 0.21
IFRD1O00458 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IFRD1O00458 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.35■□□□□ 0.21
IFRD1O00458 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
IFRD1O00458 RNU1-129P-201ENST00000384064 167 ntBASIC16.35■□□□□ 0.21
IFRD1O00458 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFRD1O00458 PMS2P4-201ENST00000412466 1052 ntBASIC16.35■□□□□ 0.21
IFRD1O00458 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.35■□□□□ 0.21
IFRD1O00458 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFRD1O00458 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.35■□□□□ 0.21
IFRD1O00458 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.35■□□□□ 0.21
IFRD1O00458 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.35■□□□□ 0.21
IFRD1O00458 MIR3909-201ENST00000579518 119 ntBASIC16.35■□□□□ 0.21
IFRD1O00458 U1.21-201ENST00000580816 167 ntBASIC16.35■□□□□ 0.21
IFRD1O00458 AC023511.2-201ENST00000618803 211 ntBASIC16.35■□□□□ 0.21
IFRD1O00458 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
IFRD1O00458 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.35■□□□□ 0.21
IFRD1O00458 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFRD1O00458 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFRD1O00458 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFRD1O00458 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFRD1O00458 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFRD1O00458 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.35■□□□□ 0.21
IFRD1O00458 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.35■□□□□ 0.21
IFRD1O00458 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFRD1O00458 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IFRD1O00458 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
IFRD1O00458 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
IFRD1O00458 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFRD1O00458 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFRD1O00458 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
IFRD1O00458 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
IFRD1O00458 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.34■□□□□ 0.21
IFRD1O00458 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IFRD1O00458 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IFRD1O00458 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.34■□□□□ 0.21
IFRD1O00458 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.34■□□□□ 0.21
IFRD1O00458 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
IFRD1O00458 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms