Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DDX39AO00148 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX39AO00148 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX39AO00148 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
DDX39AO00148 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX39AO00148 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX39AO00148 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX39AO00148 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX39AO00148 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DDX39AO00148 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
DDX39AO00148 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX39AO00148 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX39AO00148 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX39AO00148 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.58■□□□□ 0.56
DDX39AO00148 AC142381.1-201ENST00000426099 345 ntBASIC18.58■□□□□ 0.56
DDX39AO00148 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX39AO00148 HMGN1P19-201ENST00000436976 333 ntBASIC18.58■□□□□ 0.56
DDX39AO00148 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.58■□□□□ 0.56
DDX39AO00148 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX39AO00148 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.58■□□□□ 0.56
DDX39AO00148 AC105233.2-201ENST00000523697 349 ntBASIC18.58■□□□□ 0.56
DDX39AO00148 AF228730.5-201ENST00000530288 346 ntBASIC18.58■□□□□ 0.56
DDX39AO00148 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
DDX39AO00148 ALG1L8P-201ENST00000533887 760 ntBASIC18.58■□□□□ 0.56
DDX39AO00148 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.58■□□□□ 0.56
DDX39AO00148 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX39AO00148 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX39AO00148 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DDX39AO00148 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX39AO00148 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX39AO00148 FOXO1B-201ENST00000504678 1527 ntBASIC18.58■□□□□ 0.56
DDX39AO00148 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
DDX39AO00148 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX39AO00148 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX39AO00148 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX39AO00148 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX39AO00148 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DDX39AO00148 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DDX39AO00148 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DDX39AO00148 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX39AO00148 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.57■□□□□ 0.56
DDX39AO00148 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX39AO00148 FAM86GP-201ENST00000448322 971 ntBASIC18.57■□□□□ 0.56
DDX39AO00148 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX39AO00148 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX39AO00148 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.57■□□□□ 0.56
DDX39AO00148 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX39AO00148 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX39AO00148 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX39AO00148 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX39AO00148 MIR6080-201ENST00000617359 66 ntBASIC18.57■□□□□ 0.56
DDX39AO00148 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX39AO00148 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX39AO00148 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX39AO00148 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX39AO00148 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
DDX39AO00148 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
DDX39AO00148 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DDX39AO00148 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX39AO00148 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
DDX39AO00148 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX39AO00148 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX39AO00148 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DDX39AO00148 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX39AO00148 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.56■□□□□ 0.56
DDX39AO00148 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 AC008677.1-201ENST00000519230 1561 ntBASIC18.56■□□□□ 0.56
DDX39AO00148 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX39AO00148 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DDX39AO00148 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DDX39AO00148 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.56■□□□□ 0.56
DDX39AO00148 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX39AO00148 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms