Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AC136759.1-202ENST00000530858 2194 ntBASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 CICP11-201ENST00000434745 2827 ntBASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AL355802.2-201ENST00000402069 882 ntBASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 SOX15-203ENST00000570788 1093 ntBASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.46□□□□□ -0.09
BOLA2-SMG1P6H3BVE0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms