Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 IGLL3P-201ENST00000412472 434 ntBASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 HTR5BP-201ENST00000430851 1154 ntBASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CXCL1P1-201ENST00000502804 216 ntBASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL078644.1-201ENST00000609881 752 ntBASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC025580.3-201ENST00000617932 1424 ntBASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 KRT19P2-202ENST00000557173 1012 ntBASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MIR4469-201ENST00000583919 79 ntBASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL662844.4-201ENST00000606367 2838 ntBASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRBV4S1A1TA0A5B7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.33□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms