Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 ME2P1-201ENST00000426028 1970 ntBASIC19.48■□□□□ 0.71
RNF41Q9H4P4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF41Q9H4P4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 UXT-AS1-201ENST00000590504 1525 ntBASIC19.47■□□□□ 0.71
RNF41Q9H4P4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 AC023141.5-201ENST00000458585 616 ntBASIC19.47■□□□□ 0.71
RNF41Q9H4P4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RNF41Q9H4P4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 AC142381.1-201ENST00000426099 345 ntBASIC19.46■□□□□ 0.71
RNF41Q9H4P4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RNF41Q9H4P4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms