Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 FAM220BP-201ENST00000377689 816 ntBASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 RBPMS2P1-201ENST00000437762 623 ntBASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 POU5F1P6-201ENST00000466990 990 ntBASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 ALG1L8P-201ENST00000533887 760 ntBASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 AC026150.2-201ENST00000564693 1156 ntBASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 SPTSSB-204ENST00000617024 1292 ntBASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ECHDC3Q96DC8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 AL589702.1-201ENST00000641229 1509 ntBASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 PMS2P2-201ENST00000425039 1128 ntBASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 AC015911.4-201ENST00000588022 1070 ntBASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ECHDC3Q96DC8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 AC005622.1-201ENST00000636801 1703 ntBASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 ALOX12P2-203ENST00000570921 1945 ntBASIC16.49■□□□□ 0.23
ECHDC3Q96DC8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 AP3S2-216ENST00000617003 1561 ntBASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms