Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
BRD3OSQ6XYD6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
BRD3OSQ6XYD6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
BRD3OSQ6XYD6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 AC005915.1-201ENST00000624912 2018 ntBASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 AL512638.1-201ENST00000457493 794 ntBASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 AP002490.2-201ENST00000524791 560 ntBASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 AC018529.1-201ENST00000613063 361 ntBASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 AJ011932.1-201ENST00000621707 465 ntBASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 AP001094.4-201ENST00000579008 2176 ntBASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.39□□□□□ -0.27
BRD3OSQ6XYD6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.38□□□□□ -0.27
BRD3OSQ6XYD6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms