Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.7■□□□□ 0.1
CDKN2CP42773 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.7■□□□□ 0.1
CDKN2CP42773 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKN2CP42773 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDKN2CP42773 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKN2CP42773 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKN2CP42773 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDKN2CP42773 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKN2CP42773 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.7■□□□□ 0.1
CDKN2CP42773 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDKN2CP42773 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKN2CP42773 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKN2CP42773 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKN2CP42773 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKN2CP42773 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKN2CP42773 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKN2CP42773 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDKN2CP42773 NFIC-211ENST00000641145 8399 ntBASIC15.7■□□□□ 0.1
CDKN2CP42773 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKN2CP42773 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKN2CP42773 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.69■□□□□ 0.1
CDKN2CP42773 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.69■□□□□ 0.1
CDKN2CP42773 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKN2CP42773 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKN2CP42773 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDKN2CP42773 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDKN2CP42773 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDKN2CP42773 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKN2CP42773 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKN2CP42773 RPS2P1-201ENST00000434010 821 ntBASIC15.69■□□□□ 0.1
CDKN2CP42773 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.69■□□□□ 0.1
CDKN2CP42773 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.69■□□□□ 0.1
CDKN2CP42773 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.69■□□□□ 0.1
CDKN2CP42773 AC012313.10-201ENST00000623509 926 ntBASIC15.69■□□□□ 0.1
CDKN2CP42773 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKN2CP42773 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.69■□□□□ 0.1
CDKN2CP42773 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDKN2CP42773 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKN2CP42773 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.69■□□□□ 0.1
CDKN2CP42773 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDKN2CP42773 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.69■□□□□ 0.1
CDKN2CP42773 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKN2CP42773 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKN2CP42773 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKN2CP42773 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKN2CP42773 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CDKN2CP42773 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.68■□□□□ 0.1
CDKN2CP42773 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.68■□□□□ 0.1
CDKN2CP42773 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKN2CP42773 DUSP5P1-201ENST00000441325 1139 ntBASIC15.68■□□□□ 0.1
CDKN2CP42773 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 AC087641.1-201ENST00000557561 1021 ntBASIC15.68■□□□□ 0.1
CDKN2CP42773 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKN2CP42773 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.68■□□□□ 0.1
CDKN2CP42773 AC010654.1-201ENST00000615722 808 ntBASIC15.68■□□□□ 0.1
CDKN2CP42773 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CDKN2CP42773 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKN2CP42773 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDKN2CP42773 LINC01144-201ENST00000626198 1710 ntBASIC15.68■□□□□ 0.1
CDKN2CP42773 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKN2CP42773 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CDKN2CP42773 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKN2CP42773 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.67■□□□□ 0.1
CDKN2CP42773 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CDKN2CP42773 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKN2CP42773 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDKN2CP42773 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms