Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.79■□□□□ 0.28
HADHAP40939 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.79■□□□□ 0.28
HADHAP40939 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.79■□□□□ 0.28
HADHAP40939 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HADHAP40939 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
HADHAP40939 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HADHAP40939 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HADHAP40939 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HADHAP40939 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HADHAP40939 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.78■□□□□ 0.28
HADHAP40939 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.78■□□□□ 0.28
HADHAP40939 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.78■□□□□ 0.28
HADHAP40939 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HADHAP40939 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.78■□□□□ 0.28
HADHAP40939 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HADHAP40939 RPL13AP23-201ENST00000480739 586 ntBASIC16.78■□□□□ 0.28
HADHAP40939 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.78■□□□□ 0.28
HADHAP40939 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.78■□□□□ 0.28
HADHAP40939 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.78■□□□□ 0.28
HADHAP40939 CYP2A7P1-201ENST00000595391 815 ntBASIC16.78■□□□□ 0.28
HADHAP40939 ACTL9-202ENST00000612068 1252 ntBASIC16.78■□□□□ 0.28
HADHAP40939 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.78■□□□□ 0.28
HADHAP40939 AC012569.1-201ENST00000591191 1524 ntBASIC16.78■□□□□ 0.28
HADHAP40939 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HADHAP40939 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.78■□□□□ 0.28
HADHAP40939 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.78■□□□□ 0.28
HADHAP40939 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 AC104109.2-201ENST00000602919 1418 ntBASIC16.78■□□□□ 0.28
HADHAP40939 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
HADHAP40939 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HADHAP40939 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.78■□□□□ 0.28
HADHAP40939 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.77■□□□□ 0.28
HADHAP40939 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.77■□□□□ 0.28
HADHAP40939 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.77■□□□□ 0.28
HADHAP40939 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHAP40939 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.77■□□□□ 0.28
HADHAP40939 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHAP40939 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHAP40939 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.77■□□□□ 0.28
HADHAP40939 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HADHAP40939 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HADHAP40939 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.77■□□□□ 0.28
HADHAP40939 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHAP40939 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHAP40939 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHAP40939 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.77■□□□□ 0.28
HADHAP40939 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.77■□□□□ 0.28
HADHAP40939 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.77■□□□□ 0.28
HADHAP40939 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.77■□□□□ 0.28
HADHAP40939 HCG4B-203ENST00000450128 991 ntBASIC16.77■□□□□ 0.28
HADHAP40939 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.77■□□□□ 0.28
HADHAP40939 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHAP40939 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.77■□□□□ 0.28
HADHAP40939 MIR4515-201ENST00000584082 81 ntBASIC16.77■□□□□ 0.28
HADHAP40939 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HADHAP40939 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHAP40939 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HADHAP40939 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.77■□□□□ 0.28
HADHAP40939 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHAP40939 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HADHAP40939 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HADHAP40939 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.77■□□□□ 0.28
HADHAP40939 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HADHAP40939 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.77■□□□□ 0.27
HADHAP40939 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
HADHAP40939 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HADHAP40939 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
HADHAP40939 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms