Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DOC2GP-204ENST00000639052 2548 ntBASIC18.03■□□□□ 0.48
RFX1P22670 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX1P22670 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX1P22670 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX1P22670 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX1P22670 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.03■□□□□ 0.48
RFX1P22670 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RFX1P22670 AP000344.2-201ENST00000512987 629 ntBASIC18.03■□□□□ 0.48
RFX1P22670 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 AC027612.4-201ENST00000605371 583 ntBASIC18.03■□□□□ 0.48
RFX1P22670 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.03■□□□□ 0.48
RFX1P22670 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.03■□□□□ 0.48
RFX1P22670 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RFX1P22670 AL031731.1-201ENST00000642131 2094 ntBASIC18.03■□□□□ 0.48
RFX1P22670 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RFX1P22670 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX1P22670 GGT4P-201ENST00000623672 1708 ntBASIC18.03■□□□□ 0.48
RFX1P22670 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX1P22670 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.03■□□□□ 0.48
RFX1P22670 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RFX1P22670 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RFX1P22670 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
RFX1P22670 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RFX1P22670 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 MRPL20P1-201ENST00000400819 433 ntBASIC18.02■□□□□ 0.48
RFX1P22670 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
RFX1P22670 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.02■□□□□ 0.48
RFX1P22670 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.02■□□□□ 0.48
RFX1P22670 AL096865.1-201ENST00000606796 927 ntBASIC18.02■□□□□ 0.48
RFX1P22670 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.02■□□□□ 0.48
RFX1P22670 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RFX1P22670 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX1P22670 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RFX1P22670 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RFX1P22670 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.02■□□□□ 0.47
RFX1P22670 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
RFX1P22670 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RFX1P22670 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RFX1P22670 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RFX1P22670 ALOX12P2-203ENST00000570921 1945 ntBASIC18.02■□□□□ 0.47
RFX1P22670 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
RFX1P22670 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.01■□□□□ 0.47
RFX1P22670 AL671710.1-201ENST00000610245 2349 ntBASIC18.01■□□□□ 0.47
RFX1P22670 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.01■□□□□ 0.47
RFX1P22670 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RFX1P22670 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RFX1P22670 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX1P22670 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
RFX1P22670 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RFX1P22670 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.01■□□□□ 0.47
RFX1P22670 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.01■□□□□ 0.47
RFX1P22670 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RFX1P22670 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RFX1P22670 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RFX1P22670 ACTG1P14-201ENST00000446382 1122 ntBASIC18.01■□□□□ 0.47
RFX1P22670 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.01■□□□□ 0.47
RFX1P22670 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms