Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
EPHA1P21709 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
EPHA1P21709 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.29□□□□□ -0.12
EPHA1P21709 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.29□□□□□ -0.12
EPHA1P21709 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
EPHA1P21709 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.29□□□□□ -0.12
EPHA1P21709 AC002558.1-201ENST00000488906 803 ntBASIC14.29□□□□□ -0.12
EPHA1P21709 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.29□□□□□ -0.12
EPHA1P21709 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.29□□□□□ -0.12
EPHA1P21709 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.29□□□□□ -0.12
EPHA1P21709 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
EPHA1P21709 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.29□□□□□ -0.12
EPHA1P21709 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.29□□□□□ -0.12
EPHA1P21709 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.29□□□□□ -0.12
EPHA1P21709 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.29□□□□□ -0.12
EPHA1P21709 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.29□□□□□ -0.12
EPHA1P21709 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA1P21709 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
EPHA1P21709 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.28□□□□□ -0.12
EPHA1P21709 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
EPHA1P21709 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
EPHA1P21709 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA1P21709 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 AC073621.1-201ENST00000392730 636 ntBASIC14.28□□□□□ -0.12
EPHA1P21709 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.28□□□□□ -0.12
EPHA1P21709 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA1P21709 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA1P21709 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
EPHA1P21709 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA1P21709 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
EPHA1P21709 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA1P21709 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA1P21709 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.28□□□□□ -0.12
EPHA1P21709 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.28□□□□□ -0.12
EPHA1P21709 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
EPHA1P21709 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.28□□□□□ -0.12
EPHA1P21709 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA1P21709 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 AL589182.2-201ENST00000619332 1049 ntBASIC14.28□□□□□ -0.12
EPHA1P21709 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 AC116353.5-201ENST00000638148 1699 ntBASIC14.28□□□□□ -0.12
EPHA1P21709 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
EPHA1P21709 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
EPHA1P21709 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
EPHA1P21709 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA1P21709 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA1P21709 PCDHA1-201ENST00000378133 2726 ntBASIC14.28□□□□□ -0.12
EPHA1P21709 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.27□□□□□ -0.12
EPHA1P21709 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
EPHA1P21709 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.27□□□□□ -0.12
EPHA1P21709 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA1P21709 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.27□□□□□ -0.12
EPHA1P21709 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA1P21709 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA1P21709 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA1P21709 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.27□□□□□ -0.12
EPHA1P21709 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.27□□□□□ -0.12
EPHA1P21709 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
EPHA1P21709 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
EPHA1P21709 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA1P21709 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.27□□□□□ -0.12
EPHA1P21709 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms