Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRGAP2CP0DJJ0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRGAP2CP0DJJ0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRGAP2CP0DJJ0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 AC106886.4-201ENST00000623557 2502 ntBASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 GPAA1P2-202ENST00000606848 1787 ntBASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 CNN2P2-201ENST00000443536 909 ntBASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 CNN2P3-201ENST00000450201 906 ntBASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 AC073389.1-201ENST00000595595 795 ntBASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 AL136317.3-201ENST00000618497 906 ntBASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.18■□□□□ 0.5
SRGAP2CP0DJJ0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 MIR770-201ENST00000390219 98 ntBASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 MIR6080-201ENST00000617359 66 ntBASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 FOXO1B-201ENST00000504678 1527 ntBASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 AP3S2-216ENST00000617003 1561 ntBASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
SRGAP2CP0DJJ0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 GGT4P-201ENST00000623672 1708 ntBASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRGAP2CP0DJJ0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms