Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.07■□□□□ 0.48
VTNP04004 TSSK5P-201ENST00000423978 907 ntBASIC18.07■□□□□ 0.48
VTNP04004 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.07■□□□□ 0.48
VTNP04004 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.07■□□□□ 0.48
VTNP04004 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.07■□□□□ 0.48
VTNP04004 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.07■□□□□ 0.48
VTNP04004 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.07■□□□□ 0.48
VTNP04004 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VTNP04004 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTNP04004 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.07■□□□□ 0.48
VTNP04004 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.07■□□□□ 0.48
VTNP04004 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTNP04004 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTNP04004 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTNP04004 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTNP04004 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
VTNP04004 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.06■□□□□ 0.48
VTNP04004 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.06■□□□□ 0.48
VTNP04004 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.06■□□□□ 0.48
VTNP04004 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
VTNP04004 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.06■□□□□ 0.48
VTNP04004 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VTNP04004 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.06■□□□□ 0.48
VTNP04004 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
VTNP04004 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.06■□□□□ 0.48
VTNP04004 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.06■□□□□ 0.48
VTNP04004 MRPS18AP1-201ENST00000414458 589 ntBASIC18.06■□□□□ 0.48
VTNP04004 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.06■□□□□ 0.48
VTNP04004 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.06■□□□□ 0.48
VTNP04004 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.06■□□□□ 0.48
VTNP04004 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.06■□□□□ 0.48
VTNP04004 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.06■□□□□ 0.48
VTNP04004 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.06■□□□□ 0.48
VTNP04004 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
VTNP04004 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.06■□□□□ 0.48
VTNP04004 AC105021.1-202ENST00000570572 669 ntBASIC18.06■□□□□ 0.48
VTNP04004 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.06■□□□□ 0.48
VTNP04004 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.06■□□□□ 0.48
VTNP04004 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.06■□□□□ 0.48
VTNP04004 RN7SL828P-201ENST00000607615 303 ntBASIC18.06■□□□□ 0.48
VTNP04004 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VTNP04004 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.06■□□□□ 0.48
VTNP04004 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VTNP04004 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.06■□□□□ 0.48
VTNP04004 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.06■□□□□ 0.48
VTNP04004 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTNP04004 AC080080.1-201ENST00000625121 2420 ntBASIC18.06■□□□□ 0.48
VTNP04004 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VTNP04004 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 AL035456.1-201ENST00000456064 1369 ntBASIC18.05■□□□□ 0.48
VTNP04004 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VTNP04004 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 AL589702.1-201ENST00000641229 1509 ntBASIC18.05■□□□□ 0.48
VTNP04004 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VTNP04004 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.05■□□□□ 0.48
VTNP04004 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VTNP04004 TERF1P3-201ENST00000505638 1227 ntBASIC18.05■□□□□ 0.48
VTNP04004 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.05■□□□□ 0.48
VTNP04004 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.05■□□□□ 0.48
VTNP04004 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.05■□□□□ 0.48
VTNP04004 LINC02560-201ENST00000596379 459 ntBASIC18.05■□□□□ 0.48
VTNP04004 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.05■□□□□ 0.48
VTNP04004 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.05■□□□□ 0.48
VTNP04004 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.05■□□□□ 0.48
VTNP04004 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.05■□□□□ 0.48
VTNP04004 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VTNP04004 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTNP04004 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
VTNP04004 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms