Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQB1P01920 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQB1P01920 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQB1P01920 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
HLA-DQB1P01920 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.33□□□□□ -0.11
HLA-DQB1P01920 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQB1P01920 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQB1P01920 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQB1P01920 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQB1P01920 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQB1P01920 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQB1P01920 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.33□□□□□ -0.11
HLA-DQB1P01920 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 ACTG1P4-201ENST00000425123 1122 ntBASIC14.33□□□□□ -0.12
HLA-DQB1P01920 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 GUSBP12-201ENST00000513727 720 ntBASIC14.33□□□□□ -0.12
HLA-DQB1P01920 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 AC133561.5-201ENST00000635547 218 ntBASIC14.33□□□□□ -0.12
HLA-DQB1P01920 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQB1P01920 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 AL512652.2-201ENST00000625156 1716 ntBASIC14.32□□□□□ -0.12
HLA-DQB1P01920 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 NUS1P1-201ENST00000446295 882 ntBASIC14.32□□□□□ -0.12
HLA-DQB1P01920 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQB1P01920 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms