Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LCMT2O60294 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.84■□□□□ 0.13
LCMT2O60294 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
LCMT2O60294 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LCMT2O60294 AC020765.3-201ENST00000613051 740 ntBASIC15.84■□□□□ 0.13
LCMT2O60294 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LCMT2O60294 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LCMT2O60294 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.84■□□□□ 0.13
LCMT2O60294 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LCMT2O60294 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LCMT2O60294 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LCMT2O60294 AC124067.4-201ENST00000519691 2379 ntBASIC15.84■□□□□ 0.13
LCMT2O60294 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LCMT2O60294 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LCMT2O60294 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.13
LCMT2O60294 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LCMT2O60294 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LCMT2O60294 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.83■□□□□ 0.13
LCMT2O60294 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LCMT2O60294 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.83■□□□□ 0.13
LCMT2O60294 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
LCMT2O60294 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.83■□□□□ 0.12
LCMT2O60294 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LCMT2O60294 FER1L4-210ENST00000615531 5998 ntBASIC15.83■□□□□ 0.12
LCMT2O60294 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.83■□□□□ 0.12
LCMT2O60294 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.83■□□□□ 0.12
LCMT2O60294 TFAMP1-201ENST00000412727 736 ntBASIC15.83■□□□□ 0.12
LCMT2O60294 AL355306.1-201ENST00000415580 579 ntBASIC15.83■□□□□ 0.12
LCMT2O60294 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.83■□□□□ 0.12
LCMT2O60294 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.83■□□□□ 0.12
LCMT2O60294 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.83■□□□□ 0.12
LCMT2O60294 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
LCMT2O60294 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.83■□□□□ 0.12
LCMT2O60294 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.83■□□□□ 0.12
LCMT2O60294 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.83■□□□□ 0.12
LCMT2O60294 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LCMT2O60294 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.83■□□□□ 0.12
LCMT2O60294 ELL2P1-201ENST00000413990 1906 ntBASIC15.82■□□□□ 0.12
LCMT2O60294 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.82■□□□□ 0.12
LCMT2O60294 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.82■□□□□ 0.12
LCMT2O60294 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.82■□□□□ 0.12
LCMT2O60294 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
LCMT2O60294 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.82■□□□□ 0.12
LCMT2O60294 ADH5P3-201ENST00000433842 1137 ntBASIC15.82■□□□□ 0.12
LCMT2O60294 CEND1P1-201ENST00000451006 455 ntBASIC15.82■□□□□ 0.12
LCMT2O60294 KRT18P34-201ENST00000488218 1270 ntBASIC15.82■□□□□ 0.12
LCMT2O60294 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.82■□□□□ 0.12
LCMT2O60294 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.82■□□□□ 0.12
LCMT2O60294 RARRES2P8-201ENST00000566335 367 ntBASIC15.82■□□□□ 0.12
LCMT2O60294 MIR3687-2-201ENST00000577708 61 ntBASIC15.82■□□□□ 0.12
LCMT2O60294 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.82■□□□□ 0.12
LCMT2O60294 MIR4469-201ENST00000583919 79 ntBASIC15.82■□□□□ 0.12
LCMT2O60294 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LCMT2O60294 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.82■□□□□ 0.12
LCMT2O60294 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
LCMT2O60294 MIR3687-1-201ENST00000614492 61 ntBASIC15.82■□□□□ 0.12
LCMT2O60294 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LCMT2O60294 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LCMT2O60294 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LCMT2O60294 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LCMT2O60294 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.82■□□□□ 0.12
LCMT2O60294 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LCMT2O60294 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms