Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK2O00526 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK2O00526 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.32□□□□□ -0.28
UPK2O00526 AL162727.3-201ENST00000635661 2787 ntBASIC13.32□□□□□ -0.28
UPK2O00526 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
UPK2O00526 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
UPK2O00526 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK2O00526 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
UPK2O00526 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.32□□□□□ -0.28
UPK2O00526 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK2O00526 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
UPK2O00526 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
UPK2O00526 DUSP5P1-201ENST00000441325 1139 ntBASIC13.32□□□□□ -0.28
UPK2O00526 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK2O00526 IGHV3-65-201ENST00000523210 341 ntBASIC13.32□□□□□ -0.28
UPK2O00526 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK2O00526 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.32□□□□□ -0.28
UPK2O00526 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.32□□□□□ -0.28
UPK2O00526 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
UPK2O00526 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
UPK2O00526 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK2O00526 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK2O00526 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK2O00526 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.32□□□□□ -0.28
UPK2O00526 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
UPK2O00526 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
UPK2O00526 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UPK2O00526 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK2O00526 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
UPK2O00526 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.31□□□□□ -0.28
UPK2O00526 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.31□□□□□ -0.28
UPK2O00526 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
UPK2O00526 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.31□□□□□ -0.28
UPK2O00526 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
UPK2O00526 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.31□□□□□ -0.28
UPK2O00526 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.31□□□□□ -0.28
UPK2O00526 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.31□□□□□ -0.28
UPK2O00526 RNPS1P1-201ENST00000507437 918 ntBASIC13.31□□□□□ -0.28
UPK2O00526 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.31□□□□□ -0.28
UPK2O00526 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.31□□□□□ -0.28
UPK2O00526 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.31□□□□□ -0.28
UPK2O00526 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.31□□□□□ -0.28
UPK2O00526 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.31□□□□□ -0.28
UPK2O00526 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.31□□□□□ -0.28
UPK2O00526 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
UPK2O00526 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.31□□□□□ -0.28
UPK2O00526 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.31□□□□□ -0.28
UPK2O00526 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.31□□□□□ -0.28
UPK2O00526 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UPK2O00526 AC008735.5-201ENST00000623544 497 ntBASIC13.31□□□□□ -0.28
UPK2O00526 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.31□□□□□ -0.28
UPK2O00526 PGM5P2-202ENST00000637225 1043 ntBASIC13.31□□□□□ -0.28
UPK2O00526 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.31□□□□□ -0.28
UPK2O00526 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.31□□□□□ -0.28
UPK2O00526 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
UPK2O00526 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.31□□□□□ -0.28
UPK2O00526 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.31□□□□□ -0.28
UPK2O00526 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK2O00526 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK2O00526 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
UPK2O00526 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK2O00526 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.3□□□□□ -0.28
UPK2O00526 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.3□□□□□ -0.28
UPK2O00526 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
UPK2O00526 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms