Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 AC091812.2-201ENST00000619081 385 ntBASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC196A0A1B0GTZ2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 AC016027.1-202ENST00000607927 1699 ntBASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 ACTG1P14-201ENST00000446382 1122 ntBASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 C20orf181-201ENST00000623918 480 ntBASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 AL513477.1-201ENST00000602865 2407 ntBASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC196A0A1B0GTZ2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC196A0A1B0GTZ2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms