Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AL512652.2-201ENST00000625156 1716 ntBASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 MIR4492-201ENST00000581627 80 ntBASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 MPDU1-223ENST00000582151 728 ntBASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 AL358472.4-201ENST00000633140 710 ntBASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC002310.6-201ENST00000624451 1377 ntBASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.9□□□□□ -0.19
TRBV6-7A0A0A0MS04 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRBV6-7A0A0A0MS04 KRT8P39-201ENST00000396270 1433 ntBASIC13.9□□□□□ -0.19
TRBV6-7A0A0A0MS04 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRBV6-7A0A0A0MS04 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 AC091076.1-201ENST00000610741 619 ntBASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-7A0A0A0MS04 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 AL031731.1-201ENST00000642131 2094 ntBASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms