Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 AL353593.2-201ENST00000602529 1483 ntBASIC20■□□□□ 0.79
DDX49Q9Y6V7 AC024909.3-201ENST00000611513 2257 ntBASIC20■□□□□ 0.79
DDX49Q9Y6V7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 SIGLEC16-201ENST00000599858 1437 ntBASIC20■□□□□ 0.79
DDX49Q9Y6V7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX49Q9Y6V7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20■□□□□ 0.79
DDX49Q9Y6V7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 YBX2P1-201ENST00000394192 760 ntBASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 AC109462.3-201ENST00000573934 613 ntBASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 AL691403.2-201ENST00000618460 490 ntBASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX49Q9Y6V7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 RPSAP43-201ENST00000402237 625 ntBASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 AC112482.1-201ENST00000492080 688 ntBASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX49Q9Y6V7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 GPX1P2-201ENST00000429271 606 ntBASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 AC002558.1-201ENST00000488906 803 ntBASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 AC108751.1-201ENST00000490852 363 ntBASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms