Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 AC105917.1-201ENST00000506637 2539 ntBASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 AC092910.1-201ENST00000482027 1129 ntBASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 CYP2A7P1-201ENST00000595391 815 ntBASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 AC117500.6-201ENST00000624871 588 ntBASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 SLC22A20-204ENST00000530038 1673 ntBASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA11Q9Y5H2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 TPM4P1-201ENST00000436100 807 ntBASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 PRSS29P-201ENST00000440800 595 ntBASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 AL662844.1-201ENST00000546340 181 ntBASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 AC010654.1-201ENST00000615722 808 ntBASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 AC004790.2-201ENST00000623588 572 ntBASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA11Q9Y5H2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms