Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 PCDHB17P-202ENST00000623466 3066 ntBASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 AC068587.9-201ENST00000641814 219 ntBASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 AC012313.8-201ENST00000595059 5402 ntBASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 DKFZP434H168-201ENST00000567381 1905 ntBASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 HADH-202ENST00000403312 1752 ntTSL 5 BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.07
CDC42SE1Q9NRR8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 LSS-211ENST00000522411 2523 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 BX640514.1-201ENST00000583223 1918 ntBASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 AL358933.1-201ENST00000565046 2830 ntBASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 PGM5P4-201ENST00000421970 445 ntBASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms