Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 AC069262.1-201ENST00000539058 672 ntBASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPCPD1Q9NPB8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 AL512356.2-201ENST00000546955 174 ntBASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 MIR6080-201ENST00000617359 66 ntBASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.17■□□□□ 0.66
GPCPD1Q9NPB8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 CNN2P2-201ENST00000443536 909 ntBASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 CNN2P3-201ENST00000450201 906 ntBASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 AL136317.3-201ENST00000618497 906 ntBASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 TUBB3P1-201ENST00000405796 1332 ntBASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 HLA-A-202ENST00000376806 1854 ntBASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GPCPD1Q9NPB8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPCPD1Q9NPB8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
GPCPD1Q9NPB8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.15■□□□□ 0.66
GPCPD1Q9NPB8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.15■□□□□ 0.66
GPCPD1Q9NPB8 AP3S2-216ENST00000617003 1561 ntBASIC19.15■□□□□ 0.66
GPCPD1Q9NPB8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.15■□□□□ 0.66
GPCPD1Q9NPB8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GPCPD1Q9NPB8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.15■□□□□ 0.66
GPCPD1Q9NPB8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPCPD1Q9NPB8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPCPD1Q9NPB8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPCPD1Q9NPB8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.15■□□□□ 0.66
GPCPD1Q9NPB8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms