Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AC097637.2-201ENST00000624096 1997 ntBASIC17.08■□□□□ 0.32
SCG3Q8WXD2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 CRYGEP-201ENST00000412192 528 ntBASIC17.07■□□□□ 0.32
SCG3Q8WXD2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 LINC00982-205ENST00000420957 435 ntBASIC17.07■□□□□ 0.32
SCG3Q8WXD2 UPF3AP3-201ENST00000420996 769 ntBASIC17.07■□□□□ 0.32
SCG3Q8WXD2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 AC079416.2-201ENST00000625035 1193 ntBASIC17.07■□□□□ 0.32
SCG3Q8WXD2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SCG3Q8WXD2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 AC092068.3-201ENST00000587894 2016 ntBASIC17.06■□□□□ 0.32
SCG3Q8WXD2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 AC005052.1-201ENST00000625181 2492 ntBASIC17.06■□□□□ 0.32
SCG3Q8WXD2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 AL353135.1-201ENST00000606729 504 ntBASIC17.06■□□□□ 0.32
SCG3Q8WXD2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 AC079781.4-201ENST00000641908 219 ntBASIC17.06■□□□□ 0.32
SCG3Q8WXD2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCG3Q8WXD2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
SCG3Q8WXD2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCG3Q8WXD2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCG3Q8WXD2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCG3Q8WXD2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.05■□□□□ 0.32
SCG3Q8WXD2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SCG3Q8WXD2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCG3Q8WXD2 AC006449.5-201ENST00000610658 2098 ntBASIC17.05■□□□□ 0.32
SCG3Q8WXD2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SCG3Q8WXD2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCG3Q8WXD2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCG3Q8WXD2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCG3Q8WXD2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.05■□□□□ 0.32
SCG3Q8WXD2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms