Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 WASH6P-202ENST00000359512 1437 ntBASIC17.71■□□□□ 0.43
LMO3Q8TAP4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.71■□□□□ 0.42
LMO3Q8TAP4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LMO3Q8TAP4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 KRT18P58-201ENST00000527480 1120 ntBASIC17.7■□□□□ 0.42
LMO3Q8TAP4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.7■□□□□ 0.42
LMO3Q8TAP4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 AC002056.1-201ENST00000395613 760 ntBASIC17.69■□□□□ 0.42
LMO3Q8TAP4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 POLD2P1-201ENST00000511220 997 ntBASIC17.69■□□□□ 0.42
LMO3Q8TAP4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 AL161645.1-201ENST00000622716 1255 ntBASIC17.69■□□□□ 0.42
LMO3Q8TAP4 AC092902.6-201ENST00000641783 218 ntBASIC17.69■□□□□ 0.42
LMO3Q8TAP4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 U82695.1-201ENST00000635752 1889 ntBASIC17.69■□□□□ 0.42
LMO3Q8TAP4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LMO3Q8TAP4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 MIR940-201ENST00000401276 94 ntBASIC17.68■□□□□ 0.42
LMO3Q8TAP4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 MCCD1P2-201ENST00000423228 335 ntBASIC17.68■□□□□ 0.42
LMO3Q8TAP4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 ADH5P3-201ENST00000433842 1137 ntBASIC17.68■□□□□ 0.42
LMO3Q8TAP4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms