Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
PHTF2Q8N3S3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
PHTF2Q8N3S3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 AC131009.4-201ENST00000624048 1740 ntBASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 PMS2P4-201ENST00000412466 1052 ntBASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 SPDYE14P-201ENST00000442619 822 ntBASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 CNN2P2-201ENST00000443536 909 ntBASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 CNN2P3-201ENST00000450201 906 ntBASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 AL136317.3-201ENST00000618497 906 ntBASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHTF2Q8N3S3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 KRT8P49-201ENST00000604166 1432 ntBASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 AC008741.2-201ENST00000612792 3115 ntBASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 RBPMS2P1-201ENST00000437762 623 ntBASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 AC026150.2-201ENST00000564693 1156 ntBASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHTF2Q8N3S3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms