Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 AC009336.1-201ENST00000608941 1553 ntBASIC15.69■□□□□ 0.1
LPCAT4Q643R3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 AC006277.1-201ENST00000624348 1610 ntBASIC15.68■□□□□ 0.1
LPCAT4Q643R3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 TSPY14P-201ENST00000303979 915 ntBASIC15.68■□□□□ 0.1
LPCAT4Q643R3 AL390955.1-201ENST00000428694 934 ntBASIC15.68■□□□□ 0.1
LPCAT4Q643R3 RBM17P1-201ENST00000453646 1190 ntBASIC15.68■□□□□ 0.1
LPCAT4Q643R3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 AC073912.3-201ENST00000624414 853 ntBASIC15.68■□□□□ 0.1
LPCAT4Q643R3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.68■□□□□ 0.1
LPCAT4Q643R3 AL139011.1-202ENST00000642063 584 ntBASIC15.68■□□□□ 0.1
LPCAT4Q643R3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LPCAT4Q643R3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 STK19B-204ENST00000512515 211 ntBASIC15.67■□□□□ 0.1
LPCAT4Q643R3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 AP003071.4-201ENST00000562276 1284 ntBASIC15.67■□□□□ 0.1
LPCAT4Q643R3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 AL136038.4-201ENST00000603606 1261 ntBASIC15.67■□□□□ 0.1
LPCAT4Q643R3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LPCAT4Q643R3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.66■□□□□ 0.1
LPCAT4Q643R3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 AL353692.3-201ENST00000407031 1396 ntBASIC15.66■□□□□ 0.1
LPCAT4Q643R3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LPCAT4Q643R3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms