Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 AC074051.2-201ENST00000565115 352 ntBASIC16.12■□□□□ 0.17
LINGO3P0C6S8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 NSUN5P1-202ENST00000421140 1535 ntBASIC16.12■□□□□ 0.17
LINGO3P0C6S8 NSUN5P2-203ENST00000457352 1529 ntBASIC16.12■□□□□ 0.17
LINGO3P0C6S8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LINGO3P0C6S8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 AC015656.1-201ENST00000624209 3578 ntBASIC16.11■□□□□ 0.17
LINGO3P0C6S8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 AC106881.1-201ENST00000605849 3329 ntBASIC16.11■□□□□ 0.17
LINGO3P0C6S8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.11■□□□□ 0.17
LINGO3P0C6S8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 AC005104.2-201ENST00000427818 678 ntBASIC16.11■□□□□ 0.17
LINGO3P0C6S8 AC007967.3-201ENST00000434308 558 ntBASIC16.11■□□□□ 0.17
LINGO3P0C6S8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 AC104819.1-201ENST00000504587 486 ntBASIC16.11■□□□□ 0.17
LINGO3P0C6S8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.11■□□□□ 0.17
LINGO3P0C6S8 AC023157.3-201ENST00000619086 2088 ntBASIC16.1■□□□□ 0.17
LINGO3P0C6S8 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 ALOX12P2-203ENST00000570921 1945 ntBASIC16.1■□□□□ 0.17
LINGO3P0C6S8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms