Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.98■□□□□ 0.31
MT-ND3P03897 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.98■□□□□ 0.31
MT-ND3P03897 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-ND3P03897 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-ND3P03897 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.98■□□□□ 0.31
MT-ND3P03897 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-ND3P03897 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.98■□□□□ 0.31
MT-ND3P03897 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.98■□□□□ 0.31
MT-ND3P03897 MTDHP3-201ENST00000594186 672 ntBASIC16.98■□□□□ 0.31
MT-ND3P03897 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-ND3P03897 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-ND3P03897 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 AC005052.1-201ENST00000625181 2492 ntBASIC16.98■□□□□ 0.31
MT-ND3P03897 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-ND3P03897 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
MT-ND3P03897 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MT-ND3P03897 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.98■□□□□ 0.31
MT-ND3P03897 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-ND3P03897 AL596257.1-201ENST00000641463 2694 ntBASIC16.98■□□□□ 0.31
MT-ND3P03897 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-ND3P03897 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-ND3P03897 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MT-ND3P03897 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
MT-ND3P03897 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
MT-ND3P03897 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-ND3P03897 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND3P03897 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND3P03897 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
MT-ND3P03897 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND3P03897 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND3P03897 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-ND3P03897 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND3P03897 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND3P03897 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND3P03897 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND3P03897 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MT-ND3P03897 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND3P03897 AC117500.6-201ENST00000624871 588 ntBASIC16.97■□□□□ 0.31
MT-ND3P03897 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-ND3P03897 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND3P03897 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-ND3P03897 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-ND3P03897 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 FLJ16779-201ENST00000612722 7638 ntBASIC16.97■□□□□ 0.31
MT-ND3P03897 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND3P03897 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND3P03897 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
MT-ND3P03897 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
MT-ND3P03897 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 LINC00554-201ENST00000564841 3011 ntBASIC16.96■□□□□ 0.31
MT-ND3P03897 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.96■□□□□ 0.31
MT-ND3P03897 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 ACTG1P4-201ENST00000425123 1122 ntBASIC16.96■□□□□ 0.31
MT-ND3P03897 PMS2P1-201ENST00000431037 1228 ntBASIC16.96■□□□□ 0.31
MT-ND3P03897 SIGLEC30P-201ENST00000455569 941 ntBASIC16.96■□□□□ 0.31
MT-ND3P03897 FGFR3P6-201ENST00000457012 610 ntBASIC16.96■□□□□ 0.31
MT-ND3P03897 RNPS1P1-201ENST00000507437 918 ntBASIC16.96■□□□□ 0.31
MT-ND3P03897 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.96■□□□□ 0.31
MT-ND3P03897 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms