Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.38■□□□□ 0.37
OPHN1O60890 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
OPHN1O60890 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.38■□□□□ 0.37
OPHN1O60890 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.38■□□□□ 0.37
OPHN1O60890 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.38■□□□□ 0.37
OPHN1O60890 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
OPHN1O60890 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
OPHN1O60890 AP002472.1-201ENST00000577490 586 ntBASIC17.38■□□□□ 0.37
OPHN1O60890 C20orf181-201ENST00000623918 480 ntBASIC17.38■□□□□ 0.37
OPHN1O60890 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.38■□□□□ 0.37
OPHN1O60890 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.38■□□□□ 0.37
OPHN1O60890 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.38■□□□□ 0.37
OPHN1O60890 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.38■□□□□ 0.37
OPHN1O60890 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
OPHN1O60890 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.38■□□□□ 0.37
OPHN1O60890 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.38■□□□□ 0.37
OPHN1O60890 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.38■□□□□ 0.37
OPHN1O60890 AL513477.1-201ENST00000602865 2407 ntBASIC17.38■□□□□ 0.37
OPHN1O60890 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 AC063926.3-201ENST00000624734 5658 ntBASIC17.38■□□□□ 0.37
OPHN1O60890 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
OPHN1O60890 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.37■□□□□ 0.37
OPHN1O60890 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.37■□□□□ 0.37
OPHN1O60890 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.37■□□□□ 0.37
OPHN1O60890 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.37■□□□□ 0.37
OPHN1O60890 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.37■□□□□ 0.37
OPHN1O60890 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
OPHN1O60890 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 AL645728.1-201ENST00000366221 2101 ntBASIC17.37■□□□□ 0.37
OPHN1O60890 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.37■□□□□ 0.37
OPHN1O60890 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.37■□□□□ 0.37
OPHN1O60890 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.37■□□□□ 0.37
OPHN1O60890 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.37■□□□□ 0.37
OPHN1O60890 MIR4751-201ENST00000578027 74 ntBASIC17.37■□□□□ 0.37
OPHN1O60890 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.37■□□□□ 0.37
OPHN1O60890 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.37■□□□□ 0.37
OPHN1O60890 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.37■□□□□ 0.37
OPHN1O60890 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.37■□□□□ 0.37
OPHN1O60890 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.37■□□□□ 0.37
OPHN1O60890 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.37■□□□□ 0.37
OPHN1O60890 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
OPHN1O60890 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.37■□□□□ 0.37
OPHN1O60890 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.37■□□□□ 0.37
OPHN1O60890 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.37■□□□□ 0.37
OPHN1O60890 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
OPHN1O60890 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
OPHN1O60890 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
OPHN1O60890 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.37■□□□□ 0.37
OPHN1O60890 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPHN1O60890 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.36■□□□□ 0.37
OPHN1O60890 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.36■□□□□ 0.37
OPHN1O60890 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.36■□□□□ 0.37
OPHN1O60890 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
OPHN1O60890 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
OPHN1O60890 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
OPHN1O60890 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.36■□□□□ 0.37
OPHN1O60890 FAM8A3P-201ENST00000427218 844 ntBASIC17.36■□□□□ 0.37
OPHN1O60890 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
OPHN1O60890 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms