Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 AC023141.5-201ENST00000458585 616 ntBASIC17.21■□□□□ 0.35
MSI1O43347 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 IGHV3-62-201ENST00000520057 340 ntBASIC17.21■□□□□ 0.35
MSI1O43347 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.21■□□□□ 0.35
MSI1O43347 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.21■□□□□ 0.35
MSI1O43347 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
MSI1O43347 AC027307.2-201ENST00000591252 911 ntBASIC17.21■□□□□ 0.35
MSI1O43347 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MSI1O43347 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.21■□□□□ 0.35
MSI1O43347 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.21■□□□□ 0.34
MSI1O43347 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.21■□□□□ 0.34
MSI1O43347 KRT18P28-201ENST00000453838 1332 ntBASIC17.21■□□□□ 0.34
MSI1O43347 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.2■□□□□ 0.34
MSI1O43347 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
MSI1O43347 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.2■□□□□ 0.34
MSI1O43347 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MSI1O43347 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
MSI1O43347 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
MSI1O43347 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.2■□□□□ 0.34
MSI1O43347 AL139400.1-201ENST00000366220 510 ntBASIC17.2■□□□□ 0.34
MSI1O43347 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.2■□□□□ 0.34
MSI1O43347 KRT18P32-201ENST00000424695 1287 ntBASIC17.2■□□□□ 0.34
MSI1O43347 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.2■□□□□ 0.34
MSI1O43347 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.2■□□□□ 0.34
MSI1O43347 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.2■□□□□ 0.34
MSI1O43347 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.2■□□□□ 0.34
MSI1O43347 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.2■□□□□ 0.34
MSI1O43347 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.2■□□□□ 0.34
MSI1O43347 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MSI1O43347 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.2■□□□□ 0.34
MSI1O43347 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.2■□□□□ 0.34
MSI1O43347 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.2■□□□□ 0.34
MSI1O43347 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
MSI1O43347 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MSI1O43347 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.2■□□□□ 0.34
MSI1O43347 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.2■□□□□ 0.34
MSI1O43347 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.2■□□□□ 0.34
MSI1O43347 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 AC005052.1-201ENST00000625181 2492 ntBASIC17.2■□□□□ 0.34
MSI1O43347 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.2■□□□□ 0.34
MSI1O43347 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MSI1O43347 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.2■□□□□ 0.34
MSI1O43347 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MSI1O43347 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.19■□□□□ 0.34
MSI1O43347 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MSI1O43347 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 TSEN15P1-201ENST00000423257 515 ntBASIC17.19■□□□□ 0.34
MSI1O43347 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.19■□□□□ 0.34
MSI1O43347 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.19■□□□□ 0.34
MSI1O43347 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 AC008267.7-201ENST00000624570 1194 ntBASIC17.19■□□□□ 0.34
MSI1O43347 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.19■□□□□ 0.34
MSI1O43347 AC073439.1-201ENST00000624121 1774 ntBASIC17.19■□□□□ 0.34
MSI1O43347 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
MSI1O43347 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MSI1O43347 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.19■□□□□ 0.34
MSI1O43347 GGT3P-204ENST00000453783 1664 ntBASIC17.19■□□□□ 0.34
MSI1O43347 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MSI1O43347 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
MSI1O43347 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MSI1O43347 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MSI1O43347 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.18■□□□□ 0.34
MSI1O43347 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MSI1O43347 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MSI1O43347 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms