Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 IGHV3-65-201ENST00000523210 341 ntBASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 AC105917.1-201ENST00000506637 2539 ntBASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 TOP3BP1-201ENST00000420768 1380 ntBASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 AC002310.6-201ENST00000624451 1377 ntBASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 AC012640.2-201ENST00000561606 901 ntBASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 AP001005.1-201ENST00000571755 1248 ntBASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 MIR7706-201ENST00000613747 67 ntBASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 AP002414.3-201ENST00000589352 1468 ntBASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 AC068587.6-202ENST00000641839 5619 ntBASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DRB4X5D2U9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 AC006449.5-201ENST00000610658 2098 ntBASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DRB4X5D2U9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms