Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
DNMT3BQ9UBC3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3BQ9UBC3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.23■□□□□ 0.35
DNMT3BQ9UBC3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 AP001094.4-201ENST00000579008 2176 ntBASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3BQ9UBC3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 COX5BP8-201ENST00000416911 349 ntBASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 AC004840.1-201ENST00000636359 365 ntBASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3BQ9UBC3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
DNMT3BQ9UBC3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 HCG11-201ENST00000411553 5696 ntBASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 AL079307.3-201ENST00000556114 283 ntBASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.2■□□□□ 0.34
DNMT3BQ9UBC3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms